Package: fibos 2.0.1

fibos: Occlusion Surface Using the Occluded Surface and Fibonacci Occluded Surface

The Occluded Surface (OS) algorithm is a widely used approach for analyzing atomic packing in biomolecules as described by Pattabiraman N, Ward KB, Fleming PJ (1995) <doi:10.1002/jmr.300080603>. Here, we introduce 'fibos', an 'R' and 'Python' package that extends the 'OS' methodology, as presented in Soares HHM, Romanelli JPR, Fleming PJ, da Silveira CH (2024) <doi:10.1101/2024.11.01.621530>.

Authors:Herson Soares [cre, aut], Carlos Silveira [aut], João Romanelli [aut], Patrick Fleming [aut], Posit Software, PBC [cph, fnd]

fibos_2.0.1.tar.gz
fibos_2.0.1.zip(r-4.7)fibos_2.0.1.zip(r-4.6)fibos_2.0.1.zip(r-4.5)
fibos_2.0.1.tgz(r-4.6-any)fibos_2.0.1.tgz(r-4.5-any)
fibos_2.0.1.tar.gz(r-4.7-any)fibos_2.0.1.tar.gz(r-4.6-any)
fibos_2.0.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
fibos/json (API)

# Install 'fibos' in R:
install.packages('fibos', repos = c('https://hersonhebert.r-universe.dev', 'https://cloud.r-project.org'))

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

2.08 score 24 scripts 142 downloads 6 exports 41 dependencies

Last updated from:47a3a3220a. Checks:7 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64NOTE119
source / vignettesOK154
linux-release-x86_64NOTE118
macos-release-arm64NOTE184
macos-oldrel-arm64NOTE165
windows-develNOTE310
windows-releaseNOTE94
windows-oldrelNOTE67
wasm-releaseOK105

Exports:fibos_configget_radiioccluded_surfaceospreset_radiiset_radii

Dependencies:bitbit64clicliprcpp11crayondplyrfsgenericsglueherehmsjsonlitelatticelifecyclemagrittrMatrixpillarpkgconfigpngprettyunitsprogresspurrrR6rappdirsRcppRcppTOMLreadrreticulaterlangrprojrootstringistringrtibbletidyrtidyselecttzdbutf8vctrsvroomwithr